Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Fst-202ENSMUST00000223640 2612 ntBASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Casc1Q6TDU8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.11■□□□□ 0.97
Casc1Q6TDU8 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Casc1Q6TDU8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.1■□□□□ 0.97
Casc1Q6TDU8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Casc1Q6TDU8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Rab3c-203ENSMUST00000224180 967 ntBASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Casc1Q6TDU8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Casc1Q6TDU8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Casc1Q6TDU8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Casc1Q6TDU8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Casc1Q6TDU8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms