Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf4Q6PFF0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.48■□□□□ 0.39
Scaf4Q6PFF0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.47■□□□□ 0.39
Scaf4Q6PFF0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.46■□□□□ 0.39
Scaf4Q6PFF0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.46■□□□□ 0.38
Scaf4Q6PFF0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Scaf4Q6PFF0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms