Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Gm10033-202ENSMUST00000211874 928 ntBASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dhx40Q6PE54 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dhx40Q6PE54 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Gm27405-201ENSMUST00000184201 112 ntBASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dhx40Q6PE54 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.64■□□□□ 0.74
Dhx40Q6PE54 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Dhx40Q6PE54 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Dhx40Q6PE54 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Gm29257-201ENSMUST00000186115 639 ntBASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Dhx40Q6PE54 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Gm10849-201ENSMUST00000100397 618 ntBASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Dhx40Q6PE54 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms