Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcc2Q6PDG5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcc2Q6PDG5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Gm5643-201ENSMUST00000117081 966 ntBASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Smarcc2Q6PDG5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Gm18666-201ENSMUST00000190039 958 ntBASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcc2Q6PDG5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Gm13158-201ENSMUST00000122007 736 ntBASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Mir2861-201ENSMUST00000175539 82 ntBASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcc2Q6PDG5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Gm10812-201ENSMUST00000099864 546 ntBASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcc2Q6PDG5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.58■□□□□ 0.89
Smarcc2Q6PDG5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcc2Q6PDG5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms