Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ShbQ6PD21 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShbQ6PD21 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShbQ6PD21 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShbQ6PD21 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
ShbQ6PD21 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.2■□□□□ 0.66
ShbQ6PD21 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.2■□□□□ 0.66
ShbQ6PD21 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.2■□□□□ 0.66
ShbQ6PD21 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.2■□□□□ 0.66
ShbQ6PD21 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShbQ6PD21 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ShbQ6PD21 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.19■□□□□ 0.66
ShbQ6PD21 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.19■□□□□ 0.66
ShbQ6PD21 Gm18195-201ENSMUST00000207604 706 ntBASIC19.19■□□□□ 0.66
ShbQ6PD21 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.19■□□□□ 0.66
ShbQ6PD21 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.19■□□□□ 0.66
ShbQ6PD21 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShbQ6PD21 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ShbQ6PD21 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ShbQ6PD21 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ShbQ6PD21 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShbQ6PD21 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShbQ6PD21 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.17■□□□□ 0.66
ShbQ6PD21 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ShbQ6PD21 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShbQ6PD21 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.17■□□□□ 0.66
ShbQ6PD21 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShbQ6PD21 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.16■□□□□ 0.66
ShbQ6PD21 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.16■□□□□ 0.66
ShbQ6PD21 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShbQ6PD21 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ShbQ6PD21 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ShbQ6PD21 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.15■□□□□ 0.66
ShbQ6PD21 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.15■□□□□ 0.66
ShbQ6PD21 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.15■□□□□ 0.66
ShbQ6PD21 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ShbQ6PD21 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShbQ6PD21 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.14■□□□□ 0.66
ShbQ6PD21 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ShbQ6PD21 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ShbQ6PD21 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.14■□□□□ 0.65
ShbQ6PD21 Gm10052-201ENSMUST00000168019 960 ntBASIC19.14■□□□□ 0.65
ShbQ6PD21 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ShbQ6PD21 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.14■□□□□ 0.65
ShbQ6PD21 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShbQ6PD21 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.14■□□□□ 0.65
ShbQ6PD21 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShbQ6PD21 Gm7729-201ENSMUST00000050143 801 ntBASIC19.14■□□□□ 0.65
ShbQ6PD21 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ShbQ6PD21 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.14■□□□□ 0.65
ShbQ6PD21 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShbQ6PD21 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms