Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abcf1Q6P542 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abcf1Q6P542 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abcf1Q6P542 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm7290-201ENSMUST00000104990 617 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm12918-201ENSMUST00000120234 636 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm15710-201ENSMUST00000121821 636 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm5075-201ENSMUST00000196916 622 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.82■□□□□ 0.76
Abcf1Q6P542 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcf1Q6P542 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.81■□□□□ 0.76
Abcf1Q6P542 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.81■□□□□ 0.76
Abcf1Q6P542 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Abcf1Q6P542 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.8■□□□□ 0.76
Abcf1Q6P542 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.79■□□□□ 0.76
Abcf1Q6P542 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Abcf1Q6P542 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.79■□□□□ 0.76
Abcf1Q6P542 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcf1Q6P542 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.78■□□□□ 0.76
Abcf1Q6P542 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms