Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tpm4Q6IRU2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Tpm4Q6IRU2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Gm22325-201ENSMUST00000158904 308 ntBASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tpm4Q6IRU2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tpm4Q6IRU2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Nespas-201ENSMUST00000143738 1083 ntBASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm4Q6IRU2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Gm18671-201ENSMUST00000214826 683 ntBASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm4Q6IRU2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tpm4Q6IRU2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm4Q6IRU2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms