Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col11a2Q64739 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.56■■□□□ 1.04
Col11a2Q64739 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col11a2Q64739 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col11a2Q64739 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col11a2Q64739 Birc2-201ENSMUST00000054878 378 ntBASIC21.56■■□□□ 1.04
Col11a2Q64739 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col11a2Q64739 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col11a2Q64739 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col11a2Q64739 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.55■■□□□ 1.04
Col11a2Q64739 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.55■■□□□ 1.04
Col11a2Q64739 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col11a2Q64739 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col11a2Q64739 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col11a2Q64739 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.55■■□□□ 1.04
Col11a2Q64739 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.55■■□□□ 1.04
Col11a2Q64739 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col11a2Q64739 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col11a2Q64739 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Col11a2Q64739 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.55■■□□□ 1.04
Col11a2Q64739 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.55■■□□□ 1.04
Col11a2Q64739 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.55■■□□□ 1.04
Col11a2Q64739 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.54■■□□□ 1.04
Col11a2Q64739 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col11a2Q64739 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.53■■□□□ 1.04
Col11a2Q64739 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.53■■□□□ 1.04
Col11a2Q64739 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.53■■□□□ 1.04
Col11a2Q64739 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col11a2Q64739 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Col11a2Q64739 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.52■■□□□ 1.04
Col11a2Q64739 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.52■■□□□ 1.04
Col11a2Q64739 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col11a2Q64739 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col11a2Q64739 Gm6443-201ENSMUST00000203599 874 ntBASIC21.52■■□□□ 1.04
Col11a2Q64739 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.52■■□□□ 1.04
Col11a2Q64739 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Col11a2Q64739 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col11a2Q64739 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col11a2Q64739 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Col11a2Q64739 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.52■■□□□ 1.03
Col11a2Q64739 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.51■■□□□ 1.03
Col11a2Q64739 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.51■■□□□ 1.03
Col11a2Q64739 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col11a2Q64739 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.5■■□□□ 1.03
Col11a2Q64739 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.5■■□□□ 1.03
Col11a2Q64739 Gm45328-201ENSMUST00000210942 917 ntBASIC21.5■■□□□ 1.03
Col11a2Q64739 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Col11a2Q64739 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col11a2Q64739 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Col11a2Q64739 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Col11a2Q64739 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col11a2Q64739 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col11a2Q64739 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col11a2Q64739 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col11a2Q64739 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.49■■□□□ 1.03
Col11a2Q64739 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.49■■□□□ 1.03
Col11a2Q64739 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms