Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm6576-201ENSMUST00000169678 883 ntBASIC17.38■□□□□ 0.37
VclQ64727 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.38■□□□□ 0.37
VclQ64727 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.38■□□□□ 0.37
VclQ64727 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VclQ64727 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VclQ64727 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VclQ64727 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VclQ64727 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VclQ64727 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VclQ64727 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VclQ64727 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VclQ64727 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VclQ64727 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
VclQ64727 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.37■□□□□ 0.37
VclQ64727 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.37■□□□□ 0.37
VclQ64727 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.37■□□□□ 0.37
VclQ64727 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VclQ64727 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VclQ64727 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VclQ64727 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VclQ64727 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.36■□□□□ 0.37
VclQ64727 Gm12382-201ENSMUST00000122005 922 ntBASIC17.36■□□□□ 0.37
VclQ64727 Mir2861-201ENSMUST00000175539 82 ntBASIC17.36■□□□□ 0.37
VclQ64727 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.36■□□□□ 0.37
VclQ64727 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.36■□□□□ 0.37
VclQ64727 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VclQ64727 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VclQ64727 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
VclQ64727 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.35■□□□□ 0.37
VclQ64727 Gm42545-201ENSMUST00000202755 922 ntBASIC17.35■□□□□ 0.37
VclQ64727 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.35■□□□□ 0.37
VclQ64727 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VclQ64727 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VclQ64727 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
VclQ64727 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.35■□□□□ 0.37
VclQ64727 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VclQ64727 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.34■□□□□ 0.37
VclQ64727 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VclQ64727 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.34■□□□□ 0.37
VclQ64727 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.34■□□□□ 0.37
VclQ64727 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.34■□□□□ 0.37
VclQ64727 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.34■□□□□ 0.37
VclQ64727 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.34■□□□□ 0.37
VclQ64727 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VclQ64727 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VclQ64727 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VclQ64727 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VclQ64727 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VclQ64727 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VclQ64727 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VclQ64727 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VclQ64727 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VclQ64727 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VclQ64727 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VclQ64727 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VclQ64727 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms