Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AtmQ62388 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AtmQ62388 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AtmQ62388 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AtmQ62388 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AtmQ62388 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.78■□□□□ 0.28
AtmQ62388 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AtmQ62388 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Olfr129-201ENSMUST00000122318 993 ntBASIC16.78■□□□□ 0.28
AtmQ62388 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.78■□□□□ 0.28
AtmQ62388 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AtmQ62388 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.78■□□□□ 0.28
AtmQ62388 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AtmQ62388 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AtmQ62388 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.77■□□□□ 0.28
AtmQ62388 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AtmQ62388 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AtmQ62388 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AtmQ62388 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.77■□□□□ 0.28
AtmQ62388 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
AtmQ62388 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AtmQ62388 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AtmQ62388 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
AtmQ62388 Gm7638-201ENSMUST00000121348 967 ntBASIC16.77■□□□□ 0.27
AtmQ62388 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AtmQ62388 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AtmQ62388 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AtmQ62388 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
AtmQ62388 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AtmQ62388 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.76■□□□□ 0.27
AtmQ62388 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.76■□□□□ 0.27
AtmQ62388 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
AtmQ62388 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.76■□□□□ 0.27
AtmQ62388 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.76■□□□□ 0.27
AtmQ62388 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.76■□□□□ 0.27
AtmQ62388 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AtmQ62388 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
AtmQ62388 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AtmQ62388 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Gm13884-201ENSMUST00000118103 829 ntBASIC16.75■□□□□ 0.27
AtmQ62388 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
AtmQ62388 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.75■□□□□ 0.27
AtmQ62388 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.75■□□□□ 0.27
AtmQ62388 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.75■□□□□ 0.27
AtmQ62388 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AtmQ62388 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.75■□□□□ 0.27
AtmQ62388 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.74■□□□□ 0.27
AtmQ62388 Mir1668-201ENSMUST00000184114 107 ntBASIC16.74■□□□□ 0.27
AtmQ62388 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.74■□□□□ 0.27
AtmQ62388 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AtmQ62388 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
AtmQ62388 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.73■□□□□ 0.27
AtmQ62388 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.73■□□□□ 0.27
AtmQ62388 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AtmQ62388 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AtmQ62388 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AtmQ62388 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
AtmQ62388 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms