Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sycp1Q62209 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sycp1Q62209 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sycp1Q62209 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.84■□□□□ 0.77
Sycp1Q62209 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Sycp1Q62209 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.84■□□□□ 0.77
Sycp1Q62209 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sycp1Q62209 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sycp1Q62209 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sycp1Q62209 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sycp1Q62209 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sycp1Q62209 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sycp1Q62209 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sycp1Q62209 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sycp1Q62209 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sycp1Q62209 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sycp1Q62209 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Sycp1Q62209 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sycp1Q62209 Gm20049-201ENSMUST00000219950 730 ntBASIC19.83■□□□□ 0.77
Sycp1Q62209 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.83■□□□□ 0.77
Sycp1Q62209 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sycp1Q62209 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sycp1Q62209 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sycp1Q62209 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sycp1Q62209 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sycp1Q62209 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sycp1Q62209 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.82■□□□□ 0.76
Sycp1Q62209 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.82■□□□□ 0.76
Sycp1Q62209 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.82■□□□□ 0.76
Sycp1Q62209 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.82■□□□□ 0.76
Sycp1Q62209 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.82■□□□□ 0.76
Sycp1Q62209 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sycp1Q62209 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.82■□□□□ 0.76
Sycp1Q62209 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sycp1Q62209 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sycp1Q62209 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sycp1Q62209 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.82■□□□□ 0.76
Sycp1Q62209 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Sycp1Q62209 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Sycp1Q62209 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sycp1Q62209 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sycp1Q62209 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.8■□□□□ 0.76
Sycp1Q62209 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Gm12527-201ENSMUST00000117967 564 ntBASIC19.8■□□□□ 0.76
Sycp1Q62209 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Gm27275-201ENSMUST00000184318 272 ntBASIC19.8■□□□□ 0.76
Sycp1Q62209 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sycp1Q62209 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sycp1Q62209 Flg-201ENSMUST00000050758 1488 ntBASIC19.79■□□□□ 0.76
Sycp1Q62209 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.79■□□□□ 0.76
Sycp1Q62209 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sycp1Q62209 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sycp1Q62209 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.79■□□□□ 0.76
Sycp1Q62209 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sycp1Q62209 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sycp1Q62209 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms