Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.36□□□□□ -0.11
Zic4Q61467 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Zic4Q61467 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.36□□□□□ -0.11
Zic4Q61467 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Zic4Q61467 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.36□□□□□ -0.11
Zic4Q61467 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zic4Q61467 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Zic4Q61467 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
Zic4Q61467 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.35□□□□□ -0.11
Zic4Q61467 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Zic4Q61467 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zic4Q61467 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Gm13534-201ENSMUST00000121169 513 ntBASIC14.35□□□□□ -0.11
Zic4Q61467 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.35□□□□□ -0.11
Zic4Q61467 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Zic4Q61467 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Zic4Q61467 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Zic4Q61467 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Zic4Q61467 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zic4Q61467 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Zic4Q61467 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Zic4Q61467 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zic4Q61467 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.34□□□□□ -0.11
Zic4Q61467 Gm8493-201ENSMUST00000196881 489 ntBASIC14.34□□□□□ -0.11
Zic4Q61467 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.34□□□□□ -0.11
Zic4Q61467 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zic4Q61467 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zic4Q61467 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Zic4Q61467 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zic4Q61467 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Zic4Q61467 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zic4Q61467 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Zic4Q61467 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zic4Q61467 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Zic4Q61467 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Zic4Q61467 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zic4Q61467 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zic4Q61467 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Zic4Q61467 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Zic4Q61467 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.33□□□□□ -0.12
Zic4Q61467 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Zic4Q61467 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zic4Q61467 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Zic4Q61467 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zic4Q61467 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Zic4Q61467 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zic4Q61467 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zic4Q61467 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zic4Q61467 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zic4Q61467 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.32□□□□□ -0.12
Zic4Q61467 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms