Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Gm13146-201ENSMUST00000118508 780 ntBASIC16.31■□□□□ 0.2
Cd53Q61451 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd53Q61451 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd53Q61451 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd53Q61451 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cd53Q61451 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cd53Q61451 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd53Q61451 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cd53Q61451 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cd53Q61451 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Cd53Q61451 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cd53Q61451 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd53Q61451 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cd53Q61451 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd53Q61451 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Cd53Q61451 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Gm6365-201ENSMUST00000054711 744 ntBASIC16.29■□□□□ 0.2
Cd53Q61451 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cd53Q61451 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cd53Q61451 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cd53Q61451 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd53Q61451 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cd53Q61451 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.28■□□□□ 0.2
Cd53Q61451 Gm13534-201ENSMUST00000121169 513 ntBASIC16.28■□□□□ 0.2
Cd53Q61451 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd53Q61451 Gm20049-201ENSMUST00000219950 730 ntBASIC16.28■□□□□ 0.2
Cd53Q61451 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd53Q61451 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cd53Q61451 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.28■□□□□ 0.2
Cd53Q61451 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.28■□□□□ 0.2
Cd53Q61451 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd53Q61451 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd53Q61451 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cd53Q61451 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cd53Q61451 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.27■□□□□ 0.2
Cd53Q61451 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.27■□□□□ 0.2
Cd53Q61451 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cd53Q61451 Gm10812-201ENSMUST00000099864 546 ntBASIC16.27■□□□□ 0.2
Cd53Q61451 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd53Q61451 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd53Q61451 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.27■□□□□ 0.19
Cd53Q61451 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Cd53Q61451 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd53Q61451 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cd53Q61451 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cd53Q61451 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd53Q61451 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms