Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scnn1aQ61180 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Gm45058-201ENSMUST00000205810 766 ntBASIC20.41■□□□□ 0.86
Scnn1aQ61180 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scnn1aQ61180 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Scnn1aQ61180 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scnn1aQ61180 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scnn1aQ61180 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.39■□□□□ 0.86
Scnn1aQ61180 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scnn1aQ61180 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scnn1aQ61180 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.39■□□□□ 0.86
Scnn1aQ61180 Idnk-204ENSMUST00000226010 1898 ntBASIC20.39■□□□□ 0.86
Scnn1aQ61180 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Gm2274-201ENSMUST00000184539 609 ntBASIC20.39■□□□□ 0.85
Scnn1aQ61180 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Scnn1aQ61180 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Scnn1aQ61180 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.38■□□□□ 0.85
Scnn1aQ61180 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.38■□□□□ 0.85
Scnn1aQ61180 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.38■□□□□ 0.85
Scnn1aQ61180 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Iqck-206ENSMUST00000208658 2891 ntBASIC20.38■□□□□ 0.85
Scnn1aQ61180 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scnn1aQ61180 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.37■□□□□ 0.85
Scnn1aQ61180 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Gm7791-201ENSMUST00000219066 539 ntBASIC20.37■□□□□ 0.85
Scnn1aQ61180 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scnn1aQ61180 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scnn1aQ61180 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scnn1aQ61180 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scnn1aQ61180 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scnn1aQ61180 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scnn1aQ61180 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.36■□□□□ 0.85
Scnn1aQ61180 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scnn1aQ61180 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.36■□□□□ 0.85
Scnn1aQ61180 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scnn1aQ61180 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.35■□□□□ 0.85
Scnn1aQ61180 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.35■□□□□ 0.85
Scnn1aQ61180 Gm37025-201ENSMUST00000195159 829 ntBASIC20.35■□□□□ 0.85
Scnn1aQ61180 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scnn1aQ61180 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms