Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptch1Q61115 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ptch1Q61115 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
Ptch1Q61115 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ptch1Q61115 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ptch1Q61115 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ptch1Q61115 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ptch1Q61115 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ptch1Q61115 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ptch1Q61115 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC25.64■■□□□ 1.69
Ptch1Q61115 Gm12895-201ENSMUST00000122214 226 ntBASIC25.63■■□□□ 1.69
Ptch1Q61115 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ptch1Q61115 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC25.63■■□□□ 1.69
Ptch1Q61115 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
Ptch1Q61115 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptch1Q61115 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptch1Q61115 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptch1Q61115 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptch1Q61115 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptch1Q61115 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptch1Q61115 AC132104.2-201ENSMUST00000215011 266 ntBASIC25.62■■□□□ 1.69
Ptch1Q61115 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptch1Q61115 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptch1Q61115 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ptch1Q61115 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptch1Q61115 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptch1Q61115 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Ptch1Q61115 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC25.61■■□□□ 1.69
Ptch1Q61115 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC25.61■■□□□ 1.69
Ptch1Q61115 Hsf1-207ENSMUST00000228371 2102 ntBASIC25.61■■□□□ 1.69
Ptch1Q61115 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ptch1Q61115 Tgds-204ENSMUST00000228543 1594 ntBASIC25.6■■□□□ 1.69
Ptch1Q61115 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ptch1Q61115 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ptch1Q61115 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ptch1Q61115 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Ptch1Q61115 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC25.6■■□□□ 1.69
Ptch1Q61115 Gm18733-201ENSMUST00000173950 856 ntBASIC25.6■■□□□ 1.69
Ptch1Q61115 Gm37935-201ENSMUST00000192012 982 ntBASIC25.6■■□□□ 1.69
Ptch1Q61115 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ptch1Q61115 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ptch1Q61115 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC25.59■■□□□ 1.69
Ptch1Q61115 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ptch1Q61115 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ptch1Q61115 Gm6277-202ENSMUST00000224036 2779 ntBASIC25.59■■□□□ 1.69
Ptch1Q61115 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.59■■□□□ 1.69
Ptch1Q61115 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Ptch1Q61115 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
Ptch1Q61115 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ptch1Q61115 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Ptch1Q61115 Gm11452-201ENSMUST00000122376 690 ntBASIC25.58■■□□□ 1.69
Ptch1Q61115 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC25.58■■□□□ 1.69
Ptch1Q61115 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ptch1Q61115 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC25.58■■□□□ 1.69
Ptch1Q61115 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ptch1Q61115 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ptch1Q61115 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ptch1Q61115 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Ptch1Q61115 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.68
Ptch1Q61115 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ptch1Q61115 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ptch1Q61115 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ptch1Q61115 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ptch1Q61115 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ptch1Q61115 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC25.56■■□□□ 1.68
Ptch1Q61115 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC25.55■■□□□ 1.68
Ptch1Q61115 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Ptch1Q61115 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC25.55■■□□□ 1.68
Ptch1Q61115 AC153889.1-201ENSMUST00000219257 330 ntBASIC25.55■■□□□ 1.68
Ptch1Q61115 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ptch1Q61115 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ptch1Q61115 Gm18206-201ENSMUST00000207027 926 ntBASIC25.54■■□□□ 1.68
Ptch1Q61115 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Gm7856-201ENSMUST00000117514 1493 ntBASIC25.54■■□□□ 1.68
Ptch1Q61115 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Gm42922-201ENSMUST00000195887 2078 ntBASIC25.54■■□□□ 1.68
Ptch1Q61115 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC25.54■■□□□ 1.68
Ptch1Q61115 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC25.54■■□□□ 1.68
Ptch1Q61115 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC25.54■■□□□ 1.68
Ptch1Q61115 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ptch1Q61115 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms