Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.97■□□□□ 0.47
Sdf4Q61112 Gm37856-201ENSMUST00000191634 999 ntBASIC17.97■□□□□ 0.47
Sdf4Q61112 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sdf4Q61112 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.97■□□□□ 0.47
Sdf4Q61112 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.97■□□□□ 0.47
Sdf4Q61112 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdf4Q61112 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.96■□□□□ 0.47
Sdf4Q61112 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.96■□□□□ 0.47
Sdf4Q61112 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Gm18666-201ENSMUST00000190039 958 ntBASIC17.96■□□□□ 0.47
Sdf4Q61112 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.96■□□□□ 0.47
Sdf4Q61112 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sdf4Q61112 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdf4Q61112 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Sdf4Q61112 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Mir2861-201ENSMUST00000175539 82 ntBASIC17.95■□□□□ 0.46
Sdf4Q61112 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Sdf4Q61112 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdf4Q61112 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Gm15375-201ENSMUST00000119510 849 ntBASIC17.94■□□□□ 0.46
Sdf4Q61112 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.94■□□□□ 0.46
Sdf4Q61112 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdf4Q61112 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Sdf4Q61112 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.93■□□□□ 0.46
Sdf4Q61112 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.93■□□□□ 0.46
Sdf4Q61112 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.93■□□□□ 0.46
Sdf4Q61112 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.93■□□□□ 0.46
Sdf4Q61112 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Sdf4Q61112 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdf4Q61112 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Sdf4Q61112 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sdf4Q61112 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sdf4Q61112 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.92■□□□□ 0.46
Sdf4Q61112 Gm29791-202ENSMUST00000207888 369 ntBASIC17.92■□□□□ 0.46
Sdf4Q61112 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.92■□□□□ 0.46
Sdf4Q61112 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sdf4Q61112 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.92■□□□□ 0.46
Sdf4Q61112 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdf4Q61112 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.91■□□□□ 0.46
Sdf4Q61112 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sdf4Q61112 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Sdf4Q61112 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Gm20760-201ENSMUST00000179197 648 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms