Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.25■□□□□ 0.35
Trpc1Q61056 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Gm7514-201ENSMUST00000209475 934 ntBASIC17.25■□□□□ 0.35
Trpc1Q61056 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.25■□□□□ 0.35
Trpc1Q61056 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trpc1Q61056 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trpc1Q61056 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trpc1Q61056 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trpc1Q61056 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.24■□□□□ 0.35
Trpc1Q61056 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.24■□□□□ 0.35
Trpc1Q61056 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trpc1Q61056 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trpc1Q61056 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
Trpc1Q61056 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trpc1Q61056 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.23■□□□□ 0.35
Trpc1Q61056 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.23■□□□□ 0.35
Trpc1Q61056 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.23■□□□□ 0.35
Trpc1Q61056 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trpc1Q61056 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Trpc1Q61056 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Gm22325-201ENSMUST00000158904 308 ntBASIC17.22■□□□□ 0.35
Trpc1Q61056 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.22■□□□□ 0.35
Trpc1Q61056 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trpc1Q61056 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.21■□□□□ 0.35
Trpc1Q61056 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.21■□□□□ 0.35
Trpc1Q61056 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Trpc1Q61056 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trpc1Q61056 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.21■□□□□ 0.35
Trpc1Q61056 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.21■□□□□ 0.35
Trpc1Q61056 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trpc1Q61056 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trpc1Q61056 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trpc1Q61056 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trpc1Q61056 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Trpc1Q61056 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trpc1Q61056 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trpc1Q61056 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Trpc1Q61056 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trpc1Q61056 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.2■□□□□ 0.34
Trpc1Q61056 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms