Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mkrn3Q60764 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Mkrn3Q60764 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mkrn3Q60764 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.73■□□□□ 0.75
Mkrn3Q60764 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Gm15375-201ENSMUST00000119510 849 ntBASIC19.72■□□□□ 0.75
Mkrn3Q60764 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mkrn3Q60764 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mkrn3Q60764 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.71■□□□□ 0.75
Mkrn3Q60764 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mkrn3Q60764 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Mkrn3Q60764 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.7■□□□□ 0.74
Mkrn3Q60764 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mkrn3Q60764 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.69■□□□□ 0.74
Mkrn3Q60764 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.69■□□□□ 0.74
Mkrn3Q60764 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mkrn3Q60764 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.68■□□□□ 0.74
Mkrn3Q60764 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Gm18025-201ENSMUST00000221733 862 ntBASIC19.68■□□□□ 0.74
Mkrn3Q60764 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mkrn3Q60764 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Mir1199-201ENSMUST00000117015 119 ntBASIC19.67■□□□□ 0.74
Mkrn3Q60764 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Gm6576-201ENSMUST00000169678 883 ntBASIC19.67■□□□□ 0.74
Mkrn3Q60764 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.67■□□□□ 0.74
Mkrn3Q60764 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mkrn3Q60764 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mkrn3Q60764 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mkrn3Q60764 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms