Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h4Q60641 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.87■□□□□ 0.29
Nr1h4Q60641 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Nr1h4Q60641 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.86■□□□□ 0.29
Nr1h4Q60641 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h4Q60641 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nr1h4Q60641 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms