Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Prdm1Q60636 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.67■□□□□ 0.9
Prdm1Q60636 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm1Q60636 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.66■□□□□ 0.9
Prdm1Q60636 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.66■□□□□ 0.9
Prdm1Q60636 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Prdm1Q60636 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.66■□□□□ 0.9
Prdm1Q60636 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Prdm1Q60636 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm1Q60636 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.65■□□□□ 0.9
Prdm1Q60636 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Gm12382-201ENSMUST00000122005 922 ntBASIC20.65■□□□□ 0.9
Prdm1Q60636 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Prdm1Q60636 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm1Q60636 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.64■□□□□ 0.9
Prdm1Q60636 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prdm1Q60636 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Prdm1Q60636 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm1Q60636 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.64■□□□□ 0.89
Prdm1Q60636 Mir1199-201ENSMUST00000117015 119 ntBASIC20.64■□□□□ 0.89
Prdm1Q60636 Gm6576-201ENSMUST00000169678 883 ntBASIC20.64■□□□□ 0.89
Prdm1Q60636 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm1Q60636 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm1Q60636 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.63■□□□□ 0.89
Prdm1Q60636 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Prdm1Q60636 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.63■□□□□ 0.89
Prdm1Q60636 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.63■□□□□ 0.89
Prdm1Q60636 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.63■□□□□ 0.89
Prdm1Q60636 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Prdm1Q60636 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.63■□□□□ 0.89
Prdm1Q60636 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm1Q60636 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.62■□□□□ 0.89
Prdm1Q60636 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Prdm1Q60636 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
Prdm1Q60636 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.62■□□□□ 0.89
Prdm1Q60636 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.62■□□□□ 0.89
Prdm1Q60636 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Prdm1Q60636 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Prdm1Q60636 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm1Q60636 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms