Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Gm29791-202ENSMUST00000207888 369 ntBASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim38Q5SZ99 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.36■□□□□ 0.53
Trim38Q5SZ99 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim38Q5SZ99 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim38Q5SZ99 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim38Q5SZ99 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim38Q5SZ99 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim38Q5SZ99 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim38Q5SZ99 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trim38Q5SZ99 Mir2861-201ENSMUST00000175539 82 ntBASIC18.33■□□□□ 0.52
Trim38Q5SZ99 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.33■□□□□ 0.52
Trim38Q5SZ99 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim38Q5SZ99 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim38Q5SZ99 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim38Q5SZ99 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim38Q5SZ99 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms