Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom1Q5SX79 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom1Q5SX79 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.83■□□□□ 0.61
Shroom1Q5SX79 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom1Q5SX79 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Shroom1Q5SX79 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.83■□□□□ 0.61
Shroom1Q5SX79 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom1Q5SX79 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom1Q5SX79 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.82■□□□□ 0.6
Shroom1Q5SX79 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom1Q5SX79 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Gm13559-201ENSMUST00000120476 863 ntBASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom1Q5SX79 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shroom1Q5SX79 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.79■□□□□ 0.6
Shroom1Q5SX79 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom1Q5SX79 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms