Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Vps54Q5SPW0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps54Q5SPW0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps54Q5SPW0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps54Q5SPW0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps54Q5SPW0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.27■■□□□ 1
Vps54Q5SPW0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.27■■□□□ 1
Vps54Q5SPW0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Vps54Q5SPW0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps54Q5SPW0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.27■□□□□ 0.99
Vps54Q5SPW0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps54Q5SPW0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Vps54Q5SPW0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Vps54Q5SPW0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Mir6982-201ENSMUST00000184354 68 ntBASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps54Q5SPW0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps54Q5SPW0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Gm10418-201ENSMUST00000100943 576 ntBASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Gm37055-201ENSMUST00000191866 133 ntBASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps54Q5SPW0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps54Q5SPW0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Vps54Q5SPW0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps54Q5SPW0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms