Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Mir5122-201ENSMUST00000175004 89 ntBASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-4Q5R1I0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-4Q5R1I0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Gm29791-202ENSMUST00000207888 369 ntBASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-4Q5R1I0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Gm10517-202ENSMUST00000192970 758 ntBASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms