Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Gm10602-201ENSMUST00000098239 609 ntBASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav5d-4Q5R1F6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Gm38285-201ENSMUST00000192928 922 ntBASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Idnk-204ENSMUST00000226010 1898 ntBASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5d-4Q5R1F6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav5d-4Q5R1F6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5d-4Q5R1F6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5d-4Q5R1F6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
Trav5d-4Q5R1F6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Flg-201ENSMUST00000050758 1488 ntBASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Zfp783-201ENSMUST00000095946 670 ntBASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5d-4Q5R1F6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms