Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf20Q5DTM8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf20Q5DTM8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf20Q5DTM8 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.08■□□□□ 0.97
Rnf20Q5DTM8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.08■□□□□ 0.97
Rnf20Q5DTM8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rnf20Q5DTM8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf20Q5DTM8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf20Q5DTM8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Gm29791-202ENSMUST00000207888 369 ntBASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Mtag2-201ENSMUST00000058665 714 ntBASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf20Q5DTM8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Gm12441-201ENSMUST00000121806 588 ntBASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Mir2861-201ENSMUST00000175539 82 ntBASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf20Q5DTM8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Gm10138-203ENSMUST00000206952 366 ntBASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf20Q5DTM8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Mir6349-201ENSMUST00000184059 97 ntBASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
Rnf20Q5DTM8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Gm11249-201ENSMUST00000117071 859 ntBASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms