Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp13Q5BKP2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp13Q5BKP2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp13Q5BKP2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp13Q5BKP2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Usp13Q5BKP2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp13Q5BKP2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp13Q5BKP2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.88■□□□□ 0.77
Usp13Q5BKP2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp13Q5BKP2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp13Q5BKP2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Gm715-201ENSMUST00000117865 831 ntBASIC19.86■□□□□ 0.77
Usp13Q5BKP2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Gm18666-201ENSMUST00000190039 958 ntBASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp13Q5BKP2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Gm11249-201ENSMUST00000117071 859 ntBASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.85■□□□□ 0.77
Usp13Q5BKP2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp13Q5BKP2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms