Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Grk6-206ENSMUST00000224995 2971 ntBASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h1Q4VGL6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gm10231-201ENSMUST00000181584 441 ntBASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gm38027-201ENSMUST00000192315 235 ntBASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gm10175-202ENSMUST00000208752 441 ntBASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h1Q4VGL6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Gm7889-201ENSMUST00000185591 958 ntBASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rc3h1Q4VGL6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Rarb-207ENSMUST00000225921 2756 ntBASIC20.46■□□□□ 0.87
Rc3h1Q4VGL6 Idnk-204ENSMUST00000226010 1898 ntBASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h1Q4VGL6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Gm10418-201ENSMUST00000100943 576 ntBASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h1Q4VGL6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms