Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Prpf38aQ4FK66 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Gm27463-201ENSMUST00000183569 57 ntBASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Gm7889-201ENSMUST00000185591 958 ntBASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf38aQ4FK66 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38aQ4FK66 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf38aQ4FK66 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf38aQ4FK66 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf38aQ4FK66 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf38aQ4FK66 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38aQ4FK66 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Gm24841-201ENSMUST00000158676 357 ntBASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38aQ4FK66 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38aQ4FK66 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38aQ4FK66 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms