Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc9Q3V038 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ttc9Q3V038 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ttc9Q3V038 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Gm11927-201ENSMUST00000118472 759 ntBASIC18.89■□□□□ 0.61
Ttc9Q3V038 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.89■□□□□ 0.61
Ttc9Q3V038 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc9Q3V038 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.88■□□□□ 0.61
Ttc9Q3V038 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ttc9Q3V038 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.88■□□□□ 0.61
Ttc9Q3V038 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.88■□□□□ 0.61
Ttc9Q3V038 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc9Q3V038 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.87■□□□□ 0.61
Ttc9Q3V038 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.87■□□□□ 0.61
Ttc9Q3V038 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Ttc9Q3V038 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc9Q3V038 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc9Q3V038 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.85■□□□□ 0.61
Ttc9Q3V038 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc9Q3V038 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc9Q3V038 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc9Q3V038 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc9Q3V038 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc9Q3V038 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.84■□□□□ 0.61
Ttc9Q3V038 Gm11539-201ENSMUST00000119837 557 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms