Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cks1brtQ3UNC9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cks1brtQ3UNC9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cks1brtQ3UNC9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cks1brtQ3UNC9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cks1brtQ3UNC9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cks1brtQ3UNC9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cks1brtQ3UNC9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cks1brtQ3UNC9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cks1brtQ3UNC9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms