Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Gm45058-201ENSMUST00000205810 766 ntBASIC17.78■□□□□ 0.44
Usp30Q3UN04 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Usp30Q3UN04 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.78■□□□□ 0.44
Usp30Q3UN04 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 Gm6659-201ENSMUST00000174752 547 ntBASIC17.77■□□□□ 0.44
Usp30Q3UN04 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 Gm29791-202ENSMUST00000207888 369 ntBASIC17.77■□□□□ 0.44
Usp30Q3UN04 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp30Q3UN04 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Usp30Q3UN04 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.77■□□□□ 0.43
Usp30Q3UN04 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Usp30Q3UN04 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Gm2274-201ENSMUST00000184539 609 ntBASIC17.76■□□□□ 0.43
Usp30Q3UN04 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp30Q3UN04 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Gm13401-201ENSMUST00000117074 291 ntBASIC17.75■□□□□ 0.43
Usp30Q3UN04 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp30Q3UN04 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Usp30Q3UN04 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Gm24841-201ENSMUST00000158676 357 ntBASIC17.73■□□□□ 0.43
Usp30Q3UN04 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.73■□□□□ 0.43
Usp30Q3UN04 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.73■□□□□ 0.43
Usp30Q3UN04 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp30Q3UN04 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms