Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf44Q3UHJ8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf44Q3UHJ8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Gm15378-201ENSMUST00000121894 207 ntBASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf44Q3UHJ8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf44Q3UHJ8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf44Q3UHJ8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf44Q3UHJ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf44Q3UHJ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf44Q3UHJ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Gm42545-201ENSMUST00000202755 922 ntBASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf44Q3UHJ8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Gm11643-201ENSMUST00000119578 864 ntBASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf44Q3UHJ8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms