Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.39■□□□□ 0.21
Spg11Q3UHA3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Gm12644-201ENSMUST00000119935 606 ntBASIC16.38■□□□□ 0.21
Spg11Q3UHA3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Spg11Q3UHA3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Gm13401-201ENSMUST00000117074 291 ntBASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.37■□□□□ 0.21
Spg11Q3UHA3 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Spg11Q3UHA3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.36■□□□□ 0.21
Spg11Q3UHA3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.35■□□□□ 0.21
Spg11Q3UHA3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm14494-201ENSMUST00000118786 435 ntBASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Spg11Q3UHA3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Gm15165-201ENSMUST00000118140 502 ntBASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Spg11Q3UHA3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms