Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Gm27459-201ENSMUST00000184860 107 ntBASIC21.07■□□□□ 0.96
Col5a2Q3U962 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.07■□□□□ 0.96
Col5a2Q3U962 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col5a2Q3U962 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col5a2Q3U962 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col5a2Q3U962 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col5a2Q3U962 BC021767-201ENSMUST00000126387 1716 ntBASIC21.06■□□□□ 0.96
Col5a2Q3U962 Gm13884-201ENSMUST00000118103 829 ntBASIC21.06■□□□□ 0.96
Col5a2Q3U962 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col5a2Q3U962 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Col5a2Q3U962 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col5a2Q3U962 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col5a2Q3U962 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col5a2Q3U962 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.05■□□□□ 0.96
Col5a2Q3U962 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col5a2Q3U962 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Col5a2Q3U962 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col5a2Q3U962 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col5a2Q3U962 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.04■□□□□ 0.96
Col5a2Q3U962 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.04■□□□□ 0.96
Col5a2Q3U962 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Col5a2Q3U962 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col5a2Q3U962 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col5a2Q3U962 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col5a2Q3U962 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col5a2Q3U962 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.03■□□□□ 0.96
Col5a2Q3U962 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm15794-201ENSMUST00000120182 631 ntBASIC21.02■□□□□ 0.96
Col5a2Q3U962 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm28659-201ENSMUST00000188013 759 ntBASIC21.02■□□□□ 0.96
Col5a2Q3U962 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm45328-201ENSMUST00000210942 917 ntBASIC21.02■□□□□ 0.96
Col5a2Q3U962 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.02■□□□□ 0.96
Col5a2Q3U962 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col5a2Q3U962 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col5a2Q3U962 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.01■□□□□ 0.95
Col5a2Q3U962 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.01■□□□□ 0.95
Col5a2Q3U962 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.01■□□□□ 0.95
Col5a2Q3U962 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Col5a2Q3U962 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Col5a2Q3U962 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Gm6623-201ENSMUST00000173570 544 ntBASIC21■□□□□ 0.95
Col5a2Q3U962 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21■□□□□ 0.95
Col5a2Q3U962 Mir8098-201ENSMUST00000184011 137 ntBASIC21■□□□□ 0.95
Col5a2Q3U962 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col5a2Q3U962 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.99■□□□□ 0.95
Col5a2Q3U962 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms