Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Gm2399-201ENSMUST00000104944 225 ntBASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Gm6211-202ENSMUST00000167849 925 ntBASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cul4aQ3TCH7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cul4aQ3TCH7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cul4aQ3TCH7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cul4aQ3TCH7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cul4aQ3TCH7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Cul4aQ3TCH7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cul4aQ3TCH7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Gm44549-201ENSMUST00000208351 577 ntBASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Cul4aQ3TCH7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms