Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pkd1l3Q2EG98 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pkd1l3Q2EG98 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1l3Q2EG98 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1l3Q2EG98 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1l3Q2EG98 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1l3Q2EG98 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.83■□□□□ 0.12
Pkd1l3Q2EG98 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1l3Q2EG98 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pkd1l3Q2EG98 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pkd1l3Q2EG98 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pkd1l3Q2EG98 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pkd1l3Q2EG98 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.81■□□□□ 0.12
Pkd1l3Q2EG98 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pkd1l3Q2EG98 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms