Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.69■□□□□ 0.74
Ssrp1Q08943 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.69■□□□□ 0.74
Ssrp1Q08943 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssrp1Q08943 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ssrp1Q08943 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Gm11927-201ENSMUST00000118472 759 ntBASIC19.67■□□□□ 0.74
Ssrp1Q08943 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssrp1Q08943 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssrp1Q08943 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Gm8969-201ENSMUST00000199694 526 ntBASIC19.65■□□□□ 0.74
Ssrp1Q08943 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssrp1Q08943 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssrp1Q08943 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssrp1Q08943 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssrp1Q08943 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssrp1Q08943 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssrp1Q08943 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Gm2559-201ENSMUST00000201323 363 ntBASIC19.64■□□□□ 0.73
Ssrp1Q08943 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.64■□□□□ 0.73
Ssrp1Q08943 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.64■□□□□ 0.73
Ssrp1Q08943 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssrp1Q08943 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms