Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Emx1Q04742 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Emx1Q04742 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Emx1Q04742 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Emx1Q04742 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.5■□□□□ 0.23
Emx1Q04742 Tgds-204ENSMUST00000228543 1594 ntBASIC16.5■□□□□ 0.23
Emx1Q04742 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Emx1Q04742 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Emx1Q04742 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.49■□□□□ 0.23
Emx1Q04742 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Emx1Q04742 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.48■□□□□ 0.23
Emx1Q04742 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.48■□□□□ 0.23
Emx1Q04742 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Emx1Q04742 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Emx1Q04742 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Emx1Q04742 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Emx1Q04742 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.47■□□□□ 0.23
Emx1Q04742 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.47■□□□□ 0.23
Emx1Q04742 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.47■□□□□ 0.23
Emx1Q04742 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.47■□□□□ 0.23
Emx1Q04742 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Emx1Q04742 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Emx1Q04742 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.47■□□□□ 0.23
Emx1Q04742 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Emx1Q04742 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Emx1Q04742 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Emx1Q04742 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Emx1Q04742 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Emx1Q04742 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.46■□□□□ 0.23
Emx1Q04742 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.46■□□□□ 0.23
Emx1Q04742 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.46■□□□□ 0.23
Emx1Q04742 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Emx1Q04742 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.46■□□□□ 0.23
Emx1Q04742 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Emx1Q04742 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Emx1Q04742 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Emx1Q04742 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Emx1Q04742 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Emx1Q04742 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.45■□□□□ 0.22
Emx1Q04742 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.45■□□□□ 0.22
Emx1Q04742 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.45■□□□□ 0.22
Emx1Q04742 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Emx1Q04742 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Emx1Q04742 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.45■□□□□ 0.22
Emx1Q04742 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms