Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43cP86449 Gm8969-201ENSMUST00000199694 526 ntBASIC19.27■□□□□ 0.68
Trim43cP86449 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim43cP86449 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.27■□□□□ 0.68
Trim43cP86449 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim43cP86449 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim43cP86449 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.27■□□□□ 0.67
Trim43cP86449 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim43cP86449 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim43cP86449 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim43cP86449 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Trim43cP86449 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim43cP86449 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim43cP86449 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim43cP86449 Gm10698-201ENSMUST00000182663 604 ntBASIC19.26■□□□□ 0.67
Trim43cP86449 Gm37292-201ENSMUST00000192062 758 ntBASIC19.26■□□□□ 0.67
Trim43cP86449 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trim43cP86449 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43cP86449 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim43cP86449 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Gm42545-201ENSMUST00000202755 922 ntBASIC19.25■□□□□ 0.67
Trim43cP86449 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim43cP86449 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43cP86449 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim43cP86449 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim43cP86449 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim43cP86449 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim43cP86449 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim43cP86449 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.24■□□□□ 0.67
Trim43cP86449 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim43cP86449 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43cP86449 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim43cP86449 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim43cP86449 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim43cP86449 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim43cP86449 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim43cP86449 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43cP86449 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim43cP86449 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim43cP86449 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Trim43cP86449 Gm18666-201ENSMUST00000190039 958 ntBASIC19.22■□□□□ 0.67
Trim43cP86449 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim43cP86449 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim43cP86449 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim43cP86449 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim43cP86449 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.22■□□□□ 0.67
Trim43cP86449 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim43cP86449 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43cP86449 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Gm10418-201ENSMUST00000100943 576 ntBASIC19.21■□□□□ 0.67
Trim43cP86449 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Trim43cP86449 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trim43cP86449 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms