Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim43bP86448 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim43bP86448 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim43bP86448 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43bP86448 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim43bP86448 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43bP86448 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Trim43bP86448 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim43bP86448 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43bP86448 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43bP86448 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.18■□□□□ 0.5
Trim43bP86448 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim43bP86448 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim43bP86448 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim43bP86448 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim43bP86448 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.18■□□□□ 0.5
Trim43bP86448 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.18■□□□□ 0.5
Trim43bP86448 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Trim43bP86448 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim43bP86448 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43bP86448 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim43bP86448 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim43bP86448 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim43bP86448 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trim43bP86448 Gm13148-201ENSMUST00000118892 745 ntBASIC18.17■□□□□ 0.5
Trim43bP86448 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.17■□□□□ 0.5
Trim43bP86448 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim43bP86448 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.17■□□□□ 0.5
Trim43bP86448 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.17■□□□□ 0.5
Trim43bP86448 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim43bP86448 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43bP86448 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim43bP86448 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim43bP86448 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim43bP86448 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim43bP86448 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43bP86448 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim43bP86448 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Trim43bP86448 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim43bP86448 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trim43bP86448 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim43bP86448 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim43bP86448 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim43bP86448 Gm5408-201ENSMUST00000197998 747 ntBASIC18.15■□□□□ 0.5
Trim43bP86448 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.15■□□□□ 0.5
Trim43bP86448 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43bP86448 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.14■□□□□ 0.5
Trim43bP86448 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim43bP86448 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms