Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccl21aP84444 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccl21aP84444 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccl21aP84444 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.77□□□□□ -0.04
Ccl21aP84444 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccl21aP84444 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccl21aP84444 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccl21aP84444 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccl21aP84444 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccl21aP84444 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccl21aP84444 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccl21aP84444 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccl21aP84444 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccl21aP84444 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.77□□□□□ -0.05
Ccl21aP84444 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccl21aP84444 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.77□□□□□ -0.05
Ccl21aP84444 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Gm10566-201ENSMUST00000086739 996 ntBASIC14.77□□□□□ -0.05
Ccl21aP84444 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Ccl21aP84444 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccl21aP84444 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccl21aP84444 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccl21aP84444 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccl21aP84444 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Gm13884-201ENSMUST00000118103 829 ntBASIC14.76□□□□□ -0.05
Ccl21aP84444 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.76□□□□□ -0.05
Ccl21aP84444 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccl21aP84444 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccl21aP84444 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccl21aP84444 Gm37025-201ENSMUST00000195159 829 ntBASIC14.75□□□□□ -0.05
Ccl21aP84444 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccl21aP84444 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.75□□□□□ -0.05
Ccl21aP84444 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.75□□□□□ -0.05
Ccl21aP84444 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ccl21aP84444 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccl21aP84444 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccl21aP84444 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccl21aP84444 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Gm10418-201ENSMUST00000100943 576 ntBASIC14.74□□□□□ -0.05
Ccl21aP84444 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ccl21aP84444 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ccl21aP84444 Gm13401-201ENSMUST00000117074 291 ntBASIC14.74□□□□□ -0.05
Ccl21aP84444 Olfr129-201ENSMUST00000122318 993 ntBASIC14.74□□□□□ -0.05
Ccl21aP84444 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccl21aP84444 Gm37722-201ENSMUST00000193757 208 ntBASIC14.74□□□□□ -0.05
Ccl21aP84444 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccl21aP84444 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.74□□□□□ -0.05
Ccl21aP84444 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl21aP84444 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccl21aP84444 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccl21aP84444 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl21aP84444 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl21aP84444 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl21aP84444 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl21aP84444 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccl21aP84444 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl21aP84444 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccl21aP84444 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccl21aP84444 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccl21aP84444 Gm27459-201ENSMUST00000184860 107 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms