Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.85□□□□□ -0.03
SgcaP82350 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.84□□□□□ -0.03
SgcaP82350 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.84□□□□□ -0.03
SgcaP82350 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SgcaP82350 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.84□□□□□ -0.03
SgcaP82350 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.84□□□□□ -0.03
SgcaP82350 Gm43137-201ENSMUST00000198052 594 ntBASIC14.84□□□□□ -0.03
SgcaP82350 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SgcaP82350 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Tgds-204ENSMUST00000228543 1594 ntBASIC14.84□□□□□ -0.03
SgcaP82350 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SgcaP82350 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SgcaP82350 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcaP82350 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SgcaP82350 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SgcaP82350 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SgcaP82350 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SgcaP82350 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.83□□□□□ -0.03
SgcaP82350 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SgcaP82350 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.83□□□□□ -0.03
SgcaP82350 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.83□□□□□ -0.03
SgcaP82350 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Gm27801-201ENSMUST00000184174 223 ntBASIC14.83□□□□□ -0.04
SgcaP82350 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SgcaP82350 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SgcaP82350 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.83□□□□□ -0.04
SgcaP82350 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.83□□□□□ -0.04
SgcaP82350 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcaP82350 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.82□□□□□ -0.04
SgcaP82350 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.82□□□□□ -0.04
SgcaP82350 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.82□□□□□ -0.04
SgcaP82350 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.82□□□□□ -0.04
SgcaP82350 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SgcaP82350 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.82□□□□□ -0.04
SgcaP82350 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcaP82350 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.81□□□□□ -0.04
SgcaP82350 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.81□□□□□ -0.04
SgcaP82350 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SgcaP82350 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcaP82350 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms