Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf1P81269 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.33■□□□□ 0.04
Atf1P81269 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atf1P81269 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atf1P81269 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.32■□□□□ 0.04
Atf1P81269 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Atf1P81269 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Gm13148-201ENSMUST00000118892 745 ntBASIC15.32■□□□□ 0.04
Atf1P81269 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.32■□□□□ 0.04
Atf1P81269 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Mir5133-201ENSMUST00000174955 77 ntBASIC15.32■□□□□ 0.04
Atf1P81269 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.32■□□□□ 0.04
Atf1P81269 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.32■□□□□ 0.04
Atf1P81269 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.32■□□□□ 0.04
Atf1P81269 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Atf1P81269 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Zfp783-201ENSMUST00000095946 670 ntBASIC15.32■□□□□ 0.04
Atf1P81269 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Atf1P81269 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.32■□□□□ 0.04
Atf1P81269 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Atf1P81269 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf1P81269 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Atf1P81269 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.31■□□□□ 0.04
Atf1P81269 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.31■□□□□ 0.04
Atf1P81269 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Atf1P81269 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.31■□□□□ 0.04
Atf1P81269 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf1P81269 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atf1P81269 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Gm26524-201ENSMUST00000192339 390 ntBASIC15.3■□□□□ 0.04
Atf1P81269 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atf1P81269 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Flg-201ENSMUST00000050758 1488 ntBASIC15.3■□□□□ 0.04
Atf1P81269 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf1P81269 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atf1P81269 Rab3c-203ENSMUST00000224180 967 ntBASIC15.29■□□□□ 0.04
Atf1P81269 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.29■□□□□ 0.04
Atf1P81269 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf1P81269 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atf1P81269 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms