Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ybx1P62960 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.17■□□□□ 0.5
Ybx1P62960 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ybx1P62960 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.17■□□□□ 0.5
Ybx1P62960 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ybx1P62960 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.16■□□□□ 0.5
Ybx1P62960 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ybx1P62960 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.16■□□□□ 0.5
Ybx1P62960 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ybx1P62960 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ybx1P62960 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ybx1P62960 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ybx1P62960 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.15■□□□□ 0.5
Ybx1P62960 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.15■□□□□ 0.5
Ybx1P62960 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ybx1P62960 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ybx1P62960 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ybx1P62960 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.14■□□□□ 0.49
Ybx1P62960 AA414768-201ENSMUST00000121924 1257 ntBASIC18.14■□□□□ 0.49
Ybx1P62960 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ybx1P62960 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ybx1P62960 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.14■□□□□ 0.49
Ybx1P62960 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ybx1P62960 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ybx1P62960 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Ybx1P62960 Gm2274-201ENSMUST00000184539 609 ntBASIC18.13■□□□□ 0.49
Ybx1P62960 Gm4974-201ENSMUST00000209974 875 ntBASIC18.13■□□□□ 0.49
Ybx1P62960 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ybx1P62960 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ybx1P62960 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ybx1P62960 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ybx1P62960 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Ybx1P62960 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ybx1P62960 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ybx1P62960 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ybx1P62960 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ybx1P62960 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.11■□□□□ 0.49
Ybx1P62960 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.11■□□□□ 0.49
Ybx1P62960 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ybx1P62960 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.1■□□□□ 0.49
Ybx1P62960 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ybx1P62960 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ybx1P62960 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.1■□□□□ 0.49
Ybx1P62960 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms