Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpl39P62892 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpl39P62892 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.65□□□□□ -0.38
Rpl39P62892 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpl39P62892 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl39P62892 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpl39P62892 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpl39P62892 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpl39P62892 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpl39P62892 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.64□□□□□ -0.39
Rpl39P62892 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpl39P62892 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl39P62892 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.63□□□□□ -0.39
Rpl39P62892 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.63□□□□□ -0.39
Rpl39P62892 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpl39P62892 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Rpl39P62892 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpl39P62892 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.63□□□□□ -0.39
Rpl39P62892 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Rpl39P62892 Gm43173-201ENSMUST00000202246 593 ntBASIC12.63□□□□□ -0.39
Rpl39P62892 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.63□□□□□ -0.39
Rpl39P62892 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.63□□□□□ -0.39
Rpl39P62892 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpl39P62892 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpl39P62892 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rpl39P62892 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl39P62892 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rpl39P62892 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpl39P62892 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpl39P62892 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpl39P62892 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Rpl39P62892 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.62□□□□□ -0.39
Rpl39P62892 Gm8493-201ENSMUST00000196881 489 ntBASIC12.62□□□□□ -0.39
Rpl39P62892 Gm40848-201ENSMUST00000221998 324 ntBASIC12.62□□□□□ -0.39
Rpl39P62892 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms