Protein–RNA interactions for Protein: P56475

Gabrr1, Gamma-aminobutyric acid receptor subunit rho-1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrr1P56475 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.15■□□□□ 0.02
Gabrr1P56475 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gabrr1P56475 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.15■□□□□ 0.02
Gabrr1P56475 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.15■□□□□ 0.02
Gabrr1P56475 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gabrr1P56475 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Gm13146-201ENSMUST00000118508 780 ntBASIC15.14■□□□□ 0.01
Gabrr1P56475 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.14■□□□□ 0.01
Gabrr1P56475 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gabrr1P56475 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gabrr1P56475 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Gabrr1P56475 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.13■□□□□ 0.01
Gabrr1P56475 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.13■□□□□ 0.01
Gabrr1P56475 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gabrr1P56475 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gabrr1P56475 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Gabrr1P56475 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.12■□□□□ 0.01
Gabrr1P56475 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.12■□□□□ 0.01
Gabrr1P56475 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.12■□□□□ 0.01
Gabrr1P56475 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.12■□□□□ 0.01
Gabrr1P56475 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.12■□□□□ 0.01
Gabrr1P56475 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Gm10493-201ENSMUST00000097270 612 ntBASIC15.12■□□□□ 0.01
Gabrr1P56475 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gabrr1P56475 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gabrr1P56475 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gabrr1P56475 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Gabrr1P56475 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gabrr1P56475 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gabrr1P56475 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gabrr1P56475 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gabrr1P56475 Gm13534-201ENSMUST00000121169 513 ntBASIC15.1■□□□□ 0.01
Gabrr1P56475 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms