Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Msh6P54276 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC22.53■■□□□ 1.2
Msh6P54276 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC22.53■■□□□ 1.2
Msh6P54276 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.53■■□□□ 1.2
Msh6P54276 Gm29791-202ENSMUST00000207888 369 ntBASIC22.53■■□□□ 1.2
Msh6P54276 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Msh6P54276 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Msh6P54276 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.52■■□□□ 1.2
Msh6P54276 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.52■■□□□ 1.2
Msh6P54276 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Msh6P54276 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
Msh6P54276 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msh6P54276 Gm45141-201ENSMUST00000206502 1888 ntBASIC22.52■■□□□ 1.2
Msh6P54276 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msh6P54276 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msh6P54276 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msh6P54276 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Msh6P54276 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msh6P54276 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC22.52■■□□□ 1.2
Msh6P54276 Gm14859-201ENSMUST00000117752 357 ntBASIC22.51■■□□□ 1.19
Msh6P54276 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC22.51■■□□□ 1.19
Msh6P54276 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.51■■□□□ 1.19
Msh6P54276 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Msh6P54276 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC22.51■■□□□ 1.19
Msh6P54276 AC159205.3-201ENSMUST00000224614 874 ntBASIC22.51■■□□□ 1.19
Msh6P54276 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.51■■□□□ 1.19
Msh6P54276 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Msh6P54276 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Msh6P54276 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Msh6P54276 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Msh6P54276 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msh6P54276 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Msh6P54276 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.5■■□□□ 1.19
Msh6P54276 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Msh6P54276 Gm17661-201ENSMUST00000170317 270 ntBASIC22.5■■□□□ 1.19
Msh6P54276 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Msh6P54276 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.49■■□□□ 1.19
Msh6P54276 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Msh6P54276 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msh6P54276 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msh6P54276 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.49■■□□□ 1.19
Msh6P54276 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msh6P54276 Gm16061-201ENSMUST00000122167 857 ntBASIC22.49■■□□□ 1.19
Msh6P54276 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msh6P54276 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msh6P54276 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Msh6P54276 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Msh6P54276 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Gm4974-201ENSMUST00000209974 875 ntBASIC22.48■■□□□ 1.19
Msh6P54276 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Msh6P54276 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msh6P54276 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Msh6P54276 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.47■■□□□ 1.19
Msh6P54276 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms