Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdx1P52946 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Gm42545-201ENSMUST00000202755 922 ntBASIC17.51■□□□□ 0.39
Pdx1P52946 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.51■□□□□ 0.39
Pdx1P52946 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdx1P52946 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pdx1P52946 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdx1P52946 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pdx1P52946 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.5■□□□□ 0.39
Pdx1P52946 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Gm10698-201ENSMUST00000182663 604 ntBASIC17.5■□□□□ 0.39
Pdx1P52946 Gm18025-201ENSMUST00000221733 862 ntBASIC17.5■□□□□ 0.39
Pdx1P52946 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.5■□□□□ 0.39
Pdx1P52946 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdx1P52946 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.49■□□□□ 0.39
Pdx1P52946 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pdx1P52946 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pdx1P52946 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pdx1P52946 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.49■□□□□ 0.39
Pdx1P52946 Gm29791-202ENSMUST00000207888 369 ntBASIC17.49■□□□□ 0.39
Pdx1P52946 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pdx1P52946 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.49■□□□□ 0.39
Pdx1P52946 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdx1P52946 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pdx1P52946 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pdx1P52946 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pdx1P52946 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdx1P52946 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdx1P52946 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.47■□□□□ 0.39
Pdx1P52946 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pdx1P52946 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Gm13401-201ENSMUST00000117074 291 ntBASIC17.47■□□□□ 0.39
Pdx1P52946 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.47■□□□□ 0.39
Pdx1P52946 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.47■□□□□ 0.39
Pdx1P52946 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdx1P52946 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.46■□□□□ 0.39
Pdx1P52946 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.46■□□□□ 0.39
Pdx1P52946 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.46■□□□□ 0.39
Pdx1P52946 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.46■□□□□ 0.39
Pdx1P52946 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms