Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hmga2P52927 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hmga2P52927 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.1■□□□□ 0.01
Hmga2P52927 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Hmga2P52927 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmga2P52927 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Hmga2P52927 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hmga2P52927 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmga2P52927 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hmga2P52927 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Hmga2P52927 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.09■□□□□ 0.01
Hmga2P52927 Gm9988-201ENSMUST00000069786 435 ntBASIC15.09■□□□□ 0.01
Hmga2P52927 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hmga2P52927 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Hmga2P52927 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Hmga2P52927 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmga2P52927 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.09■□□□□ 0.01
Hmga2P52927 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmga2P52927 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmga2P52927 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmga2P52927 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hmga2P52927 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.08■□□□□ 0
Hmga2P52927 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.08■□□□□ 0
Hmga2P52927 Gm43017-201ENSMUST00000198296 752 ntBASIC15.08■□□□□ 0
Hmga2P52927 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hmga2P52927 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hmga2P52927 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hmga2P52927 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hmga2P52927 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.08■□□□□ 0
Hmga2P52927 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hmga2P52927 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hmga2P52927 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.07■□□□□ 0
Hmga2P52927 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.07■□□□□ 0
Hmga2P52927 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmga2P52927 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.06■□□□□ 0
Hmga2P52927 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hmga2P52927 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.06■□□□□ 0
Hmga2P52927 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hmga2P52927 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.06■□□□□ 0
Hmga2P52927 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.06■□□□□ 0
Hmga2P52927 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms